Elucidation of different cold-adapted Atlantic cod (Gadus morhua) trypsin X isoenzymes

dc.contributorHáskóli Íslandsen_US
dc.contributorUniversity of Icelanden_US
dc.contributor.authorStefánsson, Bjarki
dc.contributor.authorSandholt, Gunnar Birgir
dc.contributor.authorGuðmundsdóttir, Ágústa
dc.contributor.departmentMatvæla- og næringarfræðideild (HÍ)en_US
dc.contributor.departmentFaculty of Food Science and Nutrition (UI)en_US
dc.contributor.schoolHeilbrigðisvísindasvið (HÍ)en_US
dc.contributor.schoolSchool of Health Sciences (UI)en_US
dc.date.accessioned2016-12-05T16:20:01Z
dc.date.available2016-12-05T16:20:01Z
dc.date.issued2017-01
dc.description.abstractTrypsins from Atlantic cod (Gadus morhua), consisting of several isoenzymes, are highly active cold-adapted serine proteases. These trypsins are isolated for biomedical use in an eco-friendly manner from underutilized seafood by-products. Our group has explored the biochemical properties of trypsins and their high potential in biomedicine. For broader utilization of cod trypsins, further characterization of biochemical properties of the individual cod trypsin isoenzymes is of importance. For that purpose, a benzamidine purified trypsin isolate from Atlantic cod was analyzed. Anion exchange chromatography revealed eight peaks containing proteins around 24 kDa with tryptic activity. Based on mass spectrometric analysis, one isoenzyme gave the best match to cod trypsin I and six isoenzymes gave the best match to cod trypsin X. Amino terminal sequencing of two of these six trypsin isoenzymes showed identity to cod trypsin X. Three sequence variants of trypsin X were identified by cDNA analysis demonstrating that various forms of this enzyme exist. One trypsin X isoenzyme was selected for further characterization based on abundance and stability. Stepwise increase in catalytic efficiency (kcat/Km) of this trypsin X isoenzyme was obtained with substrates containing one to three amino acid residues. The study demonstrates that the catalytic efficiency of this trypsin X isoenzyme is comparable to that of cod trypsin I, the most abundant and highly active isoenzyme in the benzamidine cod trypsin isolate. Differences in pH stability and sensitivity to inhibitors of the trypsin X isoenzyme compared to cod trypsin I were detected that may be important for practical use.en_US
dc.description.sponsorshipResearch funded by AVS R&D Fund of Ministry of Fisheries and Agriculture in Iceland (R069-08, R11 028-11, R14 044-14) | Science and Technology Development Fund (120852-0611, 131804-0611)
dc.description.versionRitrýnt tímariten_US
dc.description.versionPeer Reviewed
dc.description.versionPre-Print
dc.format.extent11-19en_US
dc.identifier.citationStefansson, B., Sandholt, G. B., & Gudmundsdottir, Á. (2017). Elucidation of different cold-adapted Atlantic cod (Gadus morhua) trypsin X isoenzymes. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 1865(1), 11–19. doi:10.1016/j.bbapap.2016.10.005en_US
dc.identifier.doi10.1016/j.bbapap.2016.10.005
dc.identifier.issn1570-9639
dc.identifier.journalBiochimica et Biophysica Acta (BBA) - Proteins and Proteomicsis
dc.identifier.urihttps://hdl.handle.net/20.500.11815/153
dc.language.isoenen_US
dc.publisherElsevier BVen_US
dc.relation.ispartofseriesBiochimica et Biophysica Acta (BBA) - Proteins and Proteomics;1865(1)
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectBiophysicsen_US
dc.subjectAnalytical Chemistryen_US
dc.subjectBiochemistryen_US
dc.subjectMolecular Biologyen_US
dc.subjectLífefnafræðien_US
dc.subjectEfnagreiningen_US
dc.subjectLífeðlisfræðien_US
dc.subjectSameindalíffræðien_US
dc.subjectBiomedicine
dc.subjectLífvísindi
dc.subjectAtlantic cod
dc.subjectAtlantshafslax
dc.titleElucidation of different cold-adapted Atlantic cod (Gadus morhua) trypsin X isoenzymesen_US
dc.typeinfo:eu-repo/semantics/articleen_US

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