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Entirely off-grid and solar-powered DNA sequencing of microbial communities during an ice cap traverse expedition

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dc.contributor Háskólinn á Akureyri
dc.contributor University of Akureyri
dc.contributor Háskóli Íslands
dc.contributor University of Iceland
dc.contributor.author Gowers, Glen-Oliver. F.
dc.contributor.author Vince, Oliver
dc.contributor.author Charles, John-Henry
dc.contributor.author Klarenberg, Ingeborg J.
dc.contributor.author Ellis, Tom
dc.contributor.author Edwards, Arwyn
dc.date.accessioned 2019-11-23T10:19:28Z
dc.date.available 2019-11-23T10:19:28Z
dc.date.issued 2019-11-07
dc.identifier.citation Gowers, F. G., Vince, O., Charles, J., Klarenberg, I., Ellis, T. og Edwards, A. (2019). Entirely off-grid and solar-powered DNA sequencing of microbial communities during an ice cap traverse expedition. Genes, 10(11), 902. doi:10.3390/genes10110902
dc.identifier.issn 2073-4425 (eISSN)
dc.identifier.uri https://hdl.handle.net/20.500.11815/1355
dc.description.abstract Microbial communities in remote locations remain under-studied. This is particularly true on glaciers and icecaps, which cover approximately 11% of the Earth’s surface. The principal reason for this is the inaccessibility of most of these areas due to their extreme isolation and challenging environmental conditions. While remote research stations have significantly lowered the barrier to studying the microbial communities on icecaps, their use has led to a bias for data collection in the near vicinity of these institutions. Here, miniaturisation of a DNA sequencing lab suitable for off-grid metagenomic studies is demonstrated. Using human power alone, this lab was transported across Europe’s largest ice cap (Vatnajökull, Iceland) by ski and sledge. After 11 days of unsupported polar-style travel, a metagenomic study of a geothermal hot spring gorge was conducted on the remote northern edge of the ice cap. This tent-based metagenomic study resulted in over 24 h of Nanopore sequencing, powered by solar power alone. This study demonstrates the ability to conduct DNA sequencing in remote locations, far from civilised resources (mechanised transport, external power supply, internet connection, etc.), whilst greatly reducing the time from sample collection to data acquisition.
dc.description.sponsorship The following sources of funding enabled the “Return to Vatnajökull” expedition with its wider historical and scientific objectives: Andrew Croft Memorial Fund, AC Irvine Travel Fund, Alpine Ski Club, Jeremy Wilson Charitable Trust, Imperial College Exploration Board, Leathersellers’ Company Charitable Fund, Gino Watkins Memorial Fund, Wallace Watson Award, CGCA Old Centralian’s Trust, University College Oxford Overbrook Fund. Tom Ellis’ time is supported by EPSRC grant EP/M002306/1 and BBSRC grant BB/K006290/1. Ingeborg Klarenberg (I.K.) is funded by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement (No 675546—MicroArctic).
dc.format.extent 902
dc.language.iso en
dc.publisher MDPI AG
dc.relation info:eu-repo/grantAgreement/EC/H2020/675546
dc.relation.ispartofseries Genes;10(11)
dc.rights info:eu-repo/semantics/openAccess
dc.subject Genetics
dc.subject Glaciers
dc.subject Polar
dc.subject Erfðafræði
dc.subject Jöklarannsóknir
dc.title Entirely off-grid and solar-powered DNA sequencing of microbial communities during an ice cap traverse expedition
dc.type info:eu-repo/semantics/article
dcterms.license © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
dc.description.version Peer reviewed
dc.identifier.journal Genes
dc.identifier.doi 10.3390/genes10110902
dc.relation.url https://www.mdpi.com/2073-4425/10/11/902/pdf
dc.contributor.department Auðlindadeild (HA)
dc.contributor.department Faculty of Natural Resource Sciences (UA)
dc.contributor.department Líf- og umhverfisvísindadeild (HÍ)
dc.contributor.department Faculty of Life and Environmental Sciences (UI)
dc.contributor.school Viðskipta- og raunvísindasvið (HA)
dc.contributor.school School of Business and Science (UA)
dc.contributor.school Verkfræði- og náttúruvísindasvið (HÍ)
dc.contributor.school School of Engineering and Natural Sciences (UI)


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