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Deep learning-based algorithm accurately classifies sleep stages in preadolescent children with sleep-disordered breathing symptoms and age-matched controls

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dc.contributor.author Somaskandhan, Pranavan
dc.contributor.author Leppänen, Timo
dc.contributor.author Terrill, Philip I
dc.contributor.author Sigurdardottir, Sigridur
dc.contributor.author Arnardóttir, Erna Sif
dc.contributor.author Ólafsdóttir, Kristín Anna
dc.contributor.author Serwatko, Marta
dc.contributor.author Sigurðardóttir, Sigurveig Þ
dc.contributor.author Clausen, Michael Valur
dc.contributor.author Töyräs, Juha
dc.contributor.author Korkalainen, Henri
dc.date.accessioned 2023-05-05T01:05:57Z
dc.date.available 2023-05-05T01:05:57Z
dc.date.issued 2023-04-14
dc.identifier.citation Somaskandhan , P , Leppänen , T , Terrill , P I , Sigurdardottir , S , Arnardóttir , E S , Ólafsdóttir , K A , Serwatko , M , Sigurðardóttir , S Þ , Clausen , M V , Töyräs , J & Korkalainen , H 2023 , ' Deep learning-based algorithm accurately classifies sleep stages in preadolescent children with sleep-disordered breathing symptoms and age-matched controls ' , Frontiers in Neurology , vol. 14 , 1162998 , pp. 1162998 . https://doi.org/10.3389/fneur.2023.1162998
dc.identifier.issn 1664-2295
dc.identifier.other 128080491
dc.identifier.other f3cc05ce-1958-4bd4-9a6e-d5605597f0ed
dc.identifier.other 37122306
dc.identifier.other PubMedCentral: PMC10140398
dc.identifier.other unpaywall: 10.3389/fneur.2023.1162998
dc.identifier.other 85159833120
dc.identifier.uri https://hdl.handle.net/20.500.11815/4194
dc.description Funding Information: This study was funded by Nordforsk (NordSleep, no. 90458) via Business Finland (no. 5133/31/2018) and via the Icelandic Centre for Research, the Icelandic Research Fund (no. 174067), the Landspitali University Hospital Science Fund 2019 (no. 893831), the European Union’s Horizon 2020 Research and Innovation Programme (grant no. 965417), the National Health and Medical Research Council (NHMRC) of Australia (project nos. 2001729 and 2007001), the Academy of Finland (project no. 323536), the Research Committee of the Kuopio University Hospital Catchment Area for the State Research Funding (project nos. 5041794 and 5041803), and the Finnish Anti-Tuberculosis Association and the Research Foundation of the Pulmonary Diseases. The birth cohort study was funded by the European Commission: (a) under the 6th Framework Program (FOOD-CT-2005-514000) within the collaborative research initiative “EuroPrevall” and (b) under the 7th Framework Program (FP7-KBBE-2012-6; grant agreement no. 312147) within the collaborative project “iFAAM.” Additional funds were received by the Icelandic birth cohort center from Landspitali University Hospital Science Fund, and GlaxoSmithKline Iceland. The funders were not involved in the study design, collection, analysis, interpretation of data, the writing of this article or the decision to submit it for publication. Publisher Copyright: Copyright © 2023 Somaskandhan, Leppänen, Terrill, Sigurdardottir, Arnardottir, Ólafsdóttir, Serwatko, Sigurðardóttir, Clausen, Töyräs and Korkalainen.
dc.description.abstract INTRODUCTION: Visual sleep scoring has several shortcomings, including inter-scorer inconsistency, which may adversely affect diagnostic decision-making. Although automatic sleep staging in adults has been extensively studied, it is uncertain whether such sophisticated algorithms generalize well to different pediatric age groups due to distinctive EEG characteristics. The preadolescent age group (10-13-year-olds) is relatively understudied, and thus, we aimed to develop an automatic deep learning-based sleep stage classifier specifically targeting this cohort. METHODS: A dataset (n = 115) containing polysomnographic recordings of Icelandic preadolescent children with sleep-disordered breathing (SDB) symptoms, and age and sex-matched controls was utilized. We developed a combined convolutional and long short-term memory neural network architecture relying on electroencephalography (F4-M1), electrooculography (E1-M2), and chin electromyography signals. Performance relative to human scoring was further evaluated by analyzing intra- and inter-rater agreements in a subset (n = 10) of data with repeat scoring from two manual scorers. RESULTS: The deep learning-based model achieved an overall cross-validated accuracy of 84.1% (Cohen's kappa κ = 0.78). There was no meaningful performance difference between SDB-symptomatic (n = 53) and control subgroups (n = 52) [83.9% (κ = 0.78) vs. 84.2% (κ = 0.78)]. The inter-rater reliability between manual scorers was 84.6% (κ = 0.78), and the automatic method reached similar agreements with scorers, 83.4% (κ = 0.76) and 82.7% (κ = 0.75). CONCLUSION: The developed algorithm achieved high classification accuracy and substantial agreements with two manual scorers; the performance metrics compared favorably with typical inter-rater reliability between manual scorers and performance reported in previous studies. These suggest that our algorithm may facilitate less labor-intensive and reliable automatic sleep scoring in preadolescent children.
dc.format.extent 2524711
dc.format.extent 1162998
dc.language.iso en
dc.relation.ispartofseries Frontiers in Neurology; 14()
dc.rights info:eu-repo/semantics/openAccess
dc.subject Ónæmisfræði
dc.subject Verkfræðingar
dc.subject Barnalæknisfræði
dc.subject Náttúrufræðingar
dc.subject community controls
dc.subject convolutional neural network
dc.subject deep learning
dc.subject inter-rater reliability
dc.subject Pediatric sleep staging
dc.subject pediatric sleep-disordered breathing
dc.subject preadolescent cohort
dc.subject recurrent neural network
dc.subject Neurology (clinical)
dc.subject Neurology
dc.title Deep learning-based algorithm accurately classifies sleep stages in preadolescent children with sleep-disordered breathing symptoms and age-matched controls
dc.type /dk/atira/pure/researchoutput/researchoutputtypes/contributiontojournal/article
dc.description.version Peer reviewed
dc.identifier.doi 10.3389/fneur.2023.1162998
dc.relation.url http://www.scopus.com/inward/record.url?scp=85159833120&partnerID=8YFLogxK
dc.contributor.department Department of Engineering
dc.contributor.department Office of Division of Clinical Services I
dc.contributor.department Other departments


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